Bioinformatics Analyst Resume Example Georgetown Lombardi Comprehensive Cancer Center

BIOINFORMATICS ANALYST

Professional Summary

Holds diverse knowledge and experience in multi-omic in silico research. Learns new concepts quickly, working well under pressure, and communicating ideas clearly and effectively.

Skills

Omic Data Analysis
Pipeline Development
Database Implementation

Multi-omics Data Integration
High Performance Computing
Cloud Computing

Work History

Bioinformatics Analyst, 09/2013 to Current
Georgetown Lombardi Comprehensive Cancer Center – Washington, DC
U54 Multi-omics Profiling of Breast Cancer Cell Lines

Managed and organized data collected from each project and core. Collaborated with chemists to optimize analysis procedure.
Annotated differentially expressed metabolites based on multiple annotation databases; prioritized list of putative metabolites for experimental validation.
Developed portals for information visualization (in-house Metabolic-Protein Interaction informative database) and analyzed networks of differentially expressed genes and metabolites.
Provided pathway enrichment for biological interpretation.

ICBI Aging Multi-omics Study

Performed integrative analysis of RNA-seq and Lipidomics data.
Supported the development and dissemination of standards-based software tools for data visualization.

Student Researcher, 07/2013 to 08/2013
Virginia Bioinformatics Institute – Blacksburg, VA
CAN-zip: centroid based compression of next generation sequencing data using arithmetic encoding

Co-designed and coordinated NGS data compression project.
Collaborated with computer scientists for pipeline implementation.
Investigated and evaluated clustering algorithms to optimize compression ratio.

Graduate Research Assistant, 10/2012 to 06/2013
Protein Information Resource – Washington, DC
Evolutionary Prioritization of protein post-translational modifications

Achieved designing, developing and implementing the complete pipeline and analyzed the conservation status of Post-translational Modifications among Human and other mammal orthologs.
Collected, compiled and evaluated data from various Post-translational Modifications (PTMs) databases.
Designed in-house PTMs informative databases which integrated PTMs data with Protein Ontology data.
Developed bioinformatics pipeline to automate sequence alignment based PTMs conservation status checking.
Detected potential PTMs in Human, Mouse and Rat proteins.
Designed web interface with access to database and discovered properties of non-conserved PTMs.

Education

Master of Science: Bioinformatics, 2013
Georgetown University - Washington D C
GPA 3.95/4.0
Merit-based Scholarship (2012).
Officer, Public Relation Department, Georgetown University Chinese Students and Scholars Association (2012-2013)

Bachelor of Science: Bioengineering, 2012
Northwest A&F University -
GPA 3.59/4.0 (Evaluated by WES)
Second Level Scholarship and Excellent Student Leader (2008-2009).
Served as first debater in 3 competitions, earned highest score in 2 matches (2008-2010).

Additional Information

Operating Systems: Linux (RedHat/Ubuntu), Windows, MacOS.
High Performance Computing: PBS (Dell Shadowfax).
Programming Languages: Python, Perl, R, SAS, PHP, HTML, CSS.
Database Programming: MySQL, SQLite.
Databases: GenBank, RefSeq, ENSEMBL, dbSNP, GO, Uniprot, String
Software: BLAST, Galaxy, Samtools, Tophat, UCSC Genome Browser, BWA, Virtual Box, Cytoscape, XAMPP, WEKA.
Languages: Fluent in Mandarin.

Resume Overview

Companies Worked For:

Georgetown Lombardi Comprehensive Cancer Center
Virginia Bioinformatics Institute
Protein Information Resource

School Attended

Georgetown University
Northwest A&F University

Job Titles Held:

Bioinformatics Analyst
Student Researcher
Graduate Research Assistant

Degrees

Master of Science : Bioinformatics , 2013
Bachelor of Science : Bioengineering , 2012

Bioinformatics Analyst Resume Example

Resume Score: 80%

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